This is the way the tracking should behave:
If you're not forceclassing, everything tracks as is.
If you run an automatic mod (as in the server automatically forceclass in the beginning of every round), 50% of score and no kills/deaths will be tracked.
Just using the Admin Forceclass commands (which is what the files do) will be the same as a normal server.
Another possibility is to use the
"afc" command to more efficiently forceclass a weapon to everyone. It also effectively falls on the Admin Forceclass category.
I know ELiZ was working on "afc random" but I couldn't find confirmation that he finished it (but I'm pretty sure he did), you can have a try with that as well.
In fact I had a look and the "afc random" should take a random from most all weapons (if not all) including Recruit, 25 altogether.